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報告題目（一）：Comparative genomics and its implications for the evolution of biological novelty

報告人：林振國, 助理教授，圣路易斯大學

報告題目（二）： 植物基因組與基因家族分析及其與性狀關聯性

報告人：張亮生 教授，福建農林大學

報告時間：2016年7月11號上午9點

報告地點：智能實驗樓S215

林振國簡介：

Dr. Lin received his B.S. degree from Wuhan University, China in 2002. He obtained his Ph.D. degree in 2008 fromPennsylvania State University. He conducted postdoctoral research from 2008 to 2012 at University of Chicago. Before joining faculty at SLU in the Fall of 2014, Dr. Lin was a Huxley Faculty Fellow at Rice University.

Dr. Lin's primary research interests focus on developing innovative approaches by integrating computational and experimental tools to address: 1) evolutionary dynamics of genome architecture and chromosome subtelomeric regions; 2) evolution of promoter structure and gene regulation; and 3) genetic basis underlying the evolution of biological novelty and complexity.

代表論文：

Li, Y., Zhang, W., Zheng, D., Zhou, Z., Yu, W., Zhang, L., Feng, L., Liang, X., Guan, W., Zhou, J., Chen, J. and Lin, Z. Genomic Evolution of Saccharomyces cerevisiae under Chinese Rice Wine Fermentation. Genome Biol Evol. 2014: 6: 2516-2526

Lin, Z., and Li, WH. Evolution of 5’untranslated region length and gene expression reprogramming in yeasts. Mol. Biol. Evol: 2012:29:81-89

Lin, Z., and Li, WH. The evolution of aerobic fermentation in Schizosaccharomyces pombe was associated with regulatory reprogramming but not nucleosome reorganization. Mol. Biol. Evol; 2011: 28: 1407-1413

Lin, Z., and Li, WH. Expansion of hexose transporter genes was associated with evolution of aerobic fermentation in yeasts. Mol. Biol. Evol; 2011: 28: 131-142

Lin, Z., Nei, M., and Ma, H. The origins and early evolution of DNA mismatch repair genes: multiple horizontal gene transfers and co-evolution. Nucleic Acids Res2007; 35, 7591-7603.

Lin, Z., Kong, H., Nei, M., and Ma, H. Origins and evolution of the recA/RAD51 gene family: evidence for ancient gene duplication and endosymbiotic gene transfer.Proc. Natl. Acad. Sci. U S A 2006; 103, 10328-10333.

張亮生簡介：

張亮生，福建農林大學 教授（特聘）/PI，博導。2012年獲得復旦大學博士學位，2012年至2013年在賓州州立大學進行博士后研究。主要從事分子進化，基因組學和生物信息學研究。近年來以第一作者或通訊作者在 Plant Journal、Molecular Plant、Plant Physiology、New Phytologist、Clinical Infectious Diseases、Frontiers in Plant Science、Molecular Phylogenetics and Evolution、BMC Evolutionary Biology等國際期刊發表論文10篇，影響因子總和大于60

近兩年發表論文：

1)Zhang J, Tian Y, Yan L, Zhang G, Wang X, Zeng Y, Zhang J, Ma X, Tan Y, Long N, Wang Y, Ma Y, He Y, Xue Y, Hao S, Yang S, Wang W, Zhang L*, Dong Y*, Chen W*, Sheng J*. Genome of plant maca (Lepidium meyenii) illuminates genomic basis for high altitude adaptation in the central Andes. MolecularPlant.2016 May 9. pii: S1674-2052(16)30053-3 （IF:7.14)

2)Zhang L#*, Fei Chen#, GQ Zhang, YQ Zhang, ZG Lin, ZM Cheng*, ZJ Liu*. Origin and mechanism of crassulacean acid metabolism in orchids as implied by comparative transcriptomics and genomics of the carbon fixation pathway. Plant Journal. 2016 86(2):175-85. （IF:5.96)

3)Qian S, Wang Y, Ma H*, Zhang L*. Expansion and functional divergence of JmjC-containing histone demethylases: significance of duplications in ancestral angiosperms and vertebrates. Plant Physiology 168: 1321-1337, 2015(5 IF:8.04)

4)Li Q, Zhang N, Zhang L*, Ma H*: Differential evolution of members of the rhomboid gene family with conservative and divergent patterns. New Phytologist 206: 368-380, 2015 (IF=7.67).

5)Zhang L, Wang L, Cui J, Cheng F, Wang YX, Ma H: Analysis of Arabidopsis floral transcriptome: detection of new florally expressed genes and expansion of Brassicaceae-specific gene families. Frontiers in Plant Science, 5: 802, 2015 (IF=3.90).

6)Deng H#, Zhang L#, Zhang G, Zheng B, Liu Z, Wang Y, Evolutionary history of PEPC genes in green plants: Implications for the evolution of CAM in orchids, Molecular Phylogenetics and Evolution. 2016 Jan;94(Pt B):559-64 (IF=3.91).

7)Zhang GQ, …….Zhang L†, ……., Liu ZJ. The Dendrobium catenatum Lindl. genome sequence provides insights into polysaccharide synthase, floral development and adaptive evolution.. Scientific Reports. 2016 Jan 12;6:19029. (IF=5.58). †These authors jointly supervised this work

8) Niu B, Wang L, Zhang L, Ren D, Ren R, Copenhaver GP, Ma H, Wang Y. Arabidopsis Cell Division Cycle 20.1 Is Required for Normal Meiotic Spindle Assembly and Chromosome Segregation. Plant Cell. 2015 Dec;27(12):3367-82. (IF=9.34).

歡迎廣大師生參加！

林業與生物技術學院

2016年7月8日